clustering_stats

clustering_stats

Extracts basic statistics (ie. number of clusters, incorrectly clustered spectra) from .clustering files. This script only creates meaningful results if the .clustering file contains identification data which will be used to evaluate correctly and incorrectly clustered spectra.

Usage:

clustering_stats –output <stats.tsv> –min_size <3> CLUSTERING_FILE… clustering_stats (–help | –usage)

Options:

-o, --output <stats.tsv>
	Name of the result file to be created.
-s, --min_size <3>
	The minimum size a cluster must have to be evaluated [default: 3]
-h, --help	Show this help message.
--usage	Show usage information