cluster_parameter_extractor

cluster_parameter_extractor

Extracts basic parameters about the clusters found in a .clustering result file and writes these parameters to a tab-delimited file.

Usage:

cluster_parameter_extractor.py –input=<results.clustering> –output=<parameters.txt>

[–synthetic_peptides]

cluster_parameter_extractor.py (–help | –version)

Options:

-i, --input=<clustering file>
	Path to the .clustering result file to process.
-o, --output=<parameters.txt>
	Path to the output file that should be created.
--synthetic_peptides
	If this option is specified, all spectra from the dataset on synthetic peptides (PXD004732) will be analysed separately.
-h, --help	Print this help message.
-v, --version	Print the current version.